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Author Stukel, M.R. ; Kelly, T.B.
Title The carbon: (234) Thorium ratios of sinking particles in the California current ecosystem 2: Examination of a thorium sorption, desorption, and particle transport model Type $loc['typeJournal Article']
Year 2019 Publication Marine Chemistry Abbreviated Journal Marine Chemistry
Volume 212
Issue Pages 1-15
Keywords POC concentration ; sinking particles. ; depth and relationship with water ; phytoplankton
Abstract Thorium-234 (234Th) is a powerful tracer of particle dynamics and the biological pump in the surface ocean; however, variability in carbon: thorium ratios of sinking particles adds substantial uncertainty to estimates of organic carbon export. We coupled a mechanistic thorium sorption and desorption model to a one-dimensional particle sinking model that uses realistic particle settling velocity spectra. The model generates estimates of 238U234Th disequilibrium, particulate organic carbon concentration, and the C:234Th ratio of sinking particles, which are then compared to in situ measurements from quasi-Lagrangian studies conducted on six cruises in the California Current Ecosystem. Broad patterns observed in in situ measurements, including decreasing C:234Th ratios with depth and a strong correlation between sinking C:234Th and the ratio of vertically-integrated particulate organic carbon (POC) to vertically-integrated total water column 234Th, were accurately recovered by models assuming either a power law distribution of sinking speeds or a double log normal distribution of sinking speeds. Simulations suggested that the observed decrease in C:234Th with depth may be driven by preferential remineralization of carbon by particle-attached microbes. However, an alternate model structure featuring complete consumption and/or disaggregation of particles by mesozooplankton (e.g. no preferential remineralization of carbon) was also able to simulate decreasing C:234Th with depth (although the decrease was weaker), driven by 234Th adsorption onto slowly sinking particles. Model results also suggest that during bloom decays C:234Th ratios of sinking particles should be higher than expected (based on contemporaneous water column POC), because high settling velocities minimize carbon remineralization during sinking.
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Series Volume Series Issue Edition
ISSN 0304-4203
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Funding Approved $loc['no']
Call Number COAPS @ user @
Serial 1002
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Author Stukel, M.R. ; Biard, T. ; Krause, J.W. ; Ohman, M.D.
Title Large Phaeodaria in the twilight zone: Their role in the carbon cycle Type $loc['typeJournal Article']
Year 2018 Publication Association for the Sciences of Limnology and Oceanography Abbreviated Journal
Volume Issue Pages
Keywords Carbon cycle ; Ocean ; Twilight zone, Rhizarian measurements ; Aulosphaeridae
Abstract Advances in in situ imaging allow enumeration of abundant populations of large Rhizarians that compose a substantial proportion of total mesozooplankton biovolume. Using a quasi-Lagrangian sampling scheme, we quantified the abundance, vertical distributions, and sinking‐related mortality of Aulosphaeridae, an abundant family of Phaeodaria in the California Current Ecosystem. Inter‐cruise variability was high, with average concentrations at the depth of maximum abundance ranging from < 10 to > 300 cells m−3, with seasonal and interannual variability associated with temperature‐preferences and regional shoaling of the 10°C isotherm. Vertical profiles showed that these organisms were consistently most abundant at 100�150 m depth. Average turnover times with respect to sinking were 4.7�10.9 d, equating to minimum in situ population growth rates of ~ 0.1�0.2 d−1. Using simultaneous measurements of sinking organic carbon, we find that these organisms could only meet their carbon demand if their carbon : volume ratio were ~ 1 μg C mm−3. This value is substantially lower than previously used in global estimates of rhizarian biomass, but is reasonable for organisms that use large siliceous tests to inflate their cross‐sectional area without a concomitant increase in biomass. We found that Aulosphaeridae alone can intercept > 20% of sinking particles produced in the euphotic zone before these particles reach a depth of 300 m. Our results suggest that the local (and likely global) carbon biomass of Aulosphaeridae, and probably the large Rhizaria overall, needs to be revised downwards, but that these organisms nevertheless play a major role in carbon flux attenuation in the twilight zone.
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Call Number COAPS @ user @
Serial 967
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Author Stukel, M.R. ; Decima, M. ; Kelly, T.B.
Title A new approach for incorporating 15N isotopic data into linear inverse ecosystem models with Markov Chain Monte Carlo sampling Type $loc['typeJournal Article']
Year 2018 Publication PloS one Abbreviated Journal PLoS One
Volume 13
Issue 6
Pages e0199123
Keywords Isotopic data ; Nitrogen-based ecosystem models ; Phytoplankton ; Defecation by grazers ; Mortality by phytoplankton
Abstract Oceanographic field programs often use delta15N biogeochemical measurements and in situ rate measurements to investigate nitrogen cycling and planktonic ecosystem structure. However, integrative modeling approaches capable of synthesizing these distinct measurement types are lacking. We develop a novel approach for incorporating delta15N isotopic data into existing Markov Chain Monte Carlo (MCMC) random walk methods for solving linear inverse ecosystem models. We test the ability of this approach to recover food web indices (nitrate uptake, nitrogen fixation, zooplankton trophic level, and secondary production) derived from forward models simulating the planktonic ecosystems of the California Current and Amazon River Plume. We show that the MCMC with delta15N approach typically does a better job of recovering ecosystem structure than the standard MCMC or L2 minimum norm (L2MN) approaches, and also outperforms an L2MN with delta15N approach. Furthermore, we find that the MCMC with delta15N approach is robust to the removal of input equations and hence is well suited to typical pelagic ecosystem studies for which the system is usually vastly under-constrained. Our approach is easily extendable for use with delta13C isotopic measurements or variable carbon:nitrogen stoichiometry.
Address Department of Earth, Ocean, and Atmospheric Science, Florida State University, Tallahassee, FL, United States of America
Corporate Author Thesis
Publisher Place of Publication Editor
Language English
Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1932-6203
ISBN Medium
Area Expedition Conference
Funding strtoupper('2').strtolower('9912928'); strtoupper('P').strtolower('MC6005467')
Approved $loc['no']
Call Number COAPS @ user @
Serial 975
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Author Stukel, M.R. ; Décima, M. ; Landry, M.R. ; Selph, K.E.
Title Nitrogen and isotope flows through the Costa Rica Dome upwelling ecosystem: The crucial mesozooplankton role in export flux Type $loc['typeJournal Article']
Year 2018 Publication Global Biogeochemical Cycles Abbreviated Journal Global Biogeochemical Cycles
Volume 32
Issue 12
Pages 1815–1832.
Keywords Crustaceans ; Diel vertical migration ; Nitrogen cycle ; Biological carbon pump ; Nitrogen isotopes ; Linear inverse ecosystem model
Abstract The Costa Rica Dome (CRD) is an open-ocean upwelling ecosystem, with high biomasses of picophytoplankton (especially Synechococcus), mesozooplankton, and higher trophic levels. To elucidate the food web pathways supporting the trophic structure and carbon export in this unique ecosystem, we used Markov Chain Monte Carlo techniques to assimilate data from four independent realizations of δ15N and planktonic rate measurements from the CRD into steady state, multicompartment ecosystem box models (linear inverse models). Model results present well-constrained snapshots of ecosystem nitrogen and stable isotope fluxes. New production is supported by upwelled nitrate, not nitrogen fixation. Protistivory (rather than herbivory) was the most important feeding mode for mesozooplankton, which rely heavily on microzooplankton prey. Mesozooplankton play a central role in vertical nitrogen export, primarily through active transport of nitrogen consumed in the surface layer and excreted at depth, which comprised an average 36-46% of total export. Detritus or aggregate feeding is also an important mode of resource acquisition by mesozooplankton and regeneration of nutrients within the euphotic zone. As a consequence, the ratio of passively sinking particle export to phytoplankton production is very low in the CRD. Comparisons to similar models constrained with data from the nearby equatorial Pacific demonstrate that the dominant role of vertical migrators to the biological pump is a unique feature of the CRD. However, both regions show efficient nitrogen transfer from mesozooplankton to higher trophic levels (as expected for regions with large fish, cetacean, and seabird populations) despite the dominance of protists as major grazers of phytoplankton.
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Call Number COAPS @ rl18 @
Serial 978
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Author Stukel, M.R. ; Ohman, M.D. ; Kelly, T.B. ; Biard, T.
Title The Roles of Suspension-Feeding and Flux-Feeding Zooplankton as Gatekeepers of Particle Flux Into the Mesopelagic Ocean in the Northeast Pacific Type $loc['typeJournal Article']
Year 2019 Publication Frontiers in Marine Science Abbreviated Journal Front. Mar. Sci.
Volume 6
Issue Pages
Keywords biological pump ; carbon export ; remineralization length scale ; mesozooplankton ecology ; pteropods ; marine biogeochemistry ; sinking particles ; marine snow
Abstract Zooplankton are important consumers of sinking particles in the ocean's twilight zone. However, the impact of different taxa depends on their feeding mode. In contrast to typical suspension-feeding zooplankton, flux-feeding taxa preferentially consume rapidly sinking particles that would otherwise penetrate into the deep ocean. To quantify the potential impact of two flux-feeding zooplankton taxa [Aulosphaeridae (Rhizaria), and Limacina helicina (euthecosome pteropod)] and the total suspension-feeding zooplankton community, we measured depth-stratified abundances of these organisms during six cruises in the California Current Ecosystem. Using allometric-scaling relationships, we computed the percentage of carbon flux intercepted by flux feeders and suspension feeders. These estimates were compared to direct measurements of carbon flux attenuation (CFA) made using drifting sediment traps and U-238-Th-234 disequilibrium. We found that CFA in the shallow twilight zone typically ranged from 500 to 1000 m mol organic C flux remineralized per 10-m vertical depth bin. This equated to approximately 6-10% of carbon flux remineralized/10 m. The two flux-feeding taxa considered in this study could account for a substantial proportion of this flux near the base of the euphotic zone. The mean flux attenuation attributable to Aulosphaeridae was 0.69%/10 m (median = 0.21%/10 m, interquartile range = 0.04-0.81%) at their depth of maximum abundance (similar to 100 m), which would equate to similar to 10% of total flux attenuation in this depth range. The maximum flux attenuation attributable to Aulosphaeridae reached 4.2%/10 m when these protists were most abundant. L. helicina, meanwhile, could intercept 0.45-1.6% of carbon flux/10 m, which was slightly greater (on average) than the Aulosphaeridae. In contrast, suspension-feeding zooplankton in the mesopelagic (including copepods, euphausiids, appendicularians, and ostracods) had combined clearance rates of 2-81 L m(-3) day(-1) (mean of 19.6 L m(-3) day(-1)). This implies a substantial impact on slowly sinking particles, but a negligible impact on the presumably rapidly sinking fecal pellets that comprised the majority of the material collected in sediment traps. Our results highlight the need for a greater research focus on the many taxa that potentially act as flux feeders in the oceanic twilight zone.
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Series Volume Series Issue Edition
ISSN 2296-7745
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Call Number COAPS @ user @
Serial 1066
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Author Subrahmanyam, B. ; Babu, V.R. ; Murty, V.S.N. ; Rao, L.V.G.
Title Surface circulation off Somalia and western equatorial Indian Ocean during summer monsoon of 1988 from Geosat altimeter data Type $loc['typeJournal Article']
Year 1996 Publication International Journal of Remote Sensing Abbreviated Journal International Journal of Remote Sensing
Volume 17
Issue 4
Pages 761-770
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ISSN 0143-1161
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Call Number COAPS @ mfield @
Serial 713
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Author Subrahmanyam, B. ; Legler, D. M. ; Barnier, B. ; de Miranda, A. P. ; O'Brien, J. J.
Title Sensitivity of the North Atlantic circulation to momentum forcing using SPEM Type $loc['typeConference Article']
Year 2000 Publication IGARSS 2000, Honolulu, Hawaii, USA Abbreviated Journal
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Serial 797
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Author Subrahmanyam, B. ; Legler, D. M. ; Barnier, B. ; O'Brien, J. J. ; de Miranda, A. P. ; Bourassa, M.
Title Sensitivity of an ocean general circulation model to changes in surface momentum forcing Type $loc['typeConference Article']
Year 2001 Publication Abbreviated Journal
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Series Editor Series Title WMO WORLD Climate Research Programme, CAS/JSC Working Group on Numerical Experimentation, Research Activities in Atmospheric and Oceanic Modeling
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Serial 822
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Author Subrahmanyam, B. ; Legler, D. M. ; O'Brien, J. J.
Title ), Indian Ocean Circulation using TOPEX/POSEIDION Altimetry and Model Simulations Type $loc['typeReport']
Year 1999 Publication Abbreviated Journal
Volume 28
Issue Pages
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Publisher Place of Publication Editor Ritchie, H.
Language Summary Language Original Title
Series Editor Series Title Research activities in Atmospheric and Oceanic Modeling
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Serial 776
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Author Subrahmanyam, B. ; Legler, D. M. ; O'Brien, J. J.
Title Response of the North Atlantic circulation with surface momentum forcing using SPEM Model Type $loc['typeReport']
Year 2000 Publication Abbreviated Journal
Volume Issue Pages 9.13-9.14
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Publisher Place of Publication Editor Ritchie, H.
Language Summary Language Original Title
Series Editor Series Title WMO World Climate Research Programme, CAS/JSC Working Group on Numerical Experimentation, Research Activities in Atmospheric and Oceanic Modeling, Report No. 30 (WMO/TD-No.987)
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Serial 801
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