Shin, D. W., Cocke, S., LaRow, T. E., & O'Brien, J. J. (2005). Seasonal Surface Air Temperature and Precipitation in the FSU Climate Model Coupled to the CLM2. J. Climate, 18(16), 3217–3228.
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Shin, D. W., & Krishnamurti, T. N. (1999). Improving Precipitation Forecasts over the Global Tropical Belt. Meteorology and Atmospheric Physics, 70(1-2), 1–14.
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Shin, D. W., LaRow, T. E., & Cocke, S. (2003). Convective scheme and resolution impacts on seasonal precipitation forecasts. Geophys. Res. Lett., 30(20).
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Shinoda, T., Han, W., Zamudio, L., Lien, R. - C., & Katsumata, M. (2017). Remote Ocean Response to the Madden-Julian Oscillation during the DYNAMO Field Campaign: Impact on Somali Current System and the Seychelles-Chagos Thermocline Ridge. Atmosphere, 8(9), 171.
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Shinoda, T., Kiladis, G. N., & Roundy, P. E. (2009). Statistical representation of equatorial waves and tropical instability waves in the Pacific Ocean. In Atmospheric Research (Vol. 94, pp. 37–44).
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Shropshire, T., Morey, S. L., Chassignet, E. P., Bozec, A., Coles, V. J., Landry, M. R., et al. (2019). Quantifying spatiotemporal variability in zooplankton dynamics in the Gulf of Mexico with a physical-biogeochemical model.
Abstract: Zooplankton play an important role in global biogeochemistry and their secondary production supports valuable fisheries of the world's oceans. Currently, zooplankton abundances cannot be estimated using remote sensing techniques. Hence, coupled physical-biogeochemical models (PBMs) provide an important tool for studying zooplankton on regional and global scales. However, evaluating the accuracy of zooplankton abundance estimates from PBMs has been a major challenge as a result of sparse observations. In this study, we configure a PBM for the Gulf of Mexico (GoM) from 1993�2012 and validate the model against an extensive combination of in situ biomass and rate measurements including total mesozooplankton biomass, size-fractionated mesozooplankton biomass and grazing rates, microzooplankton specific grazing rates, surface chlorophyll, deep chlorophyll maximum depth, phytoplankton specific growth rates, and net primary production. Spatial variability in mesozooplankton biomass climatology observed in a multi-decadal database for the northern GoM is well resolved by the model with a statistically significant (p < 0.01) correlation of 0.90. Mesozooplankton secondary production for the region averaged 66 + 8 mt C yr−1 equivalent to approximately 10 % of NPP and ranged from 51 to 82 mt C yr−1. In terms of diet, model results from the shelf regions suggest that herbivory is the dominant feeding mode for small mesozooplankton (< 1-mm) whereas larger mesozooplankton are primarily carnivorous. However, in open-ocean, oligotrophic regions, both groups of mesozooplankton have proportionally greater reliance on heterotrophic protists as a food source. This highlights the important role of microbial and protistan food webs in sustaining mesozooplankton biomass in the GoM which serves as the primary food source for early life stages of many commercially-important fish species, including tuna.
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Siefridt, L., Barnier, B., Legler, D. M., & O'Brien, J. J. (1998). 5-day average wind over North-West Atlantic from ERS1 using a variational analysis. Global Atmosphere and Ocean System, 5, 317–344.
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Singh, K., Jardak, M., Sandu, A., Bowman, K., Lee, M., & Jones, D. (2011). Construction of non-diagonal background error covariance matrices for global chemical data assimilation. Geosci. Model Dev., 4(2), 299–316.
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Smedstad, O. M., Hurlburt, H. E., Metzger, E. J., Rhodes, R. C., Shriver, J. F., Wallcraft, A. J., et al. (2003). An operational Eddy resolving 1/16° global ocean nowcast/forecast system. Journal of Marine Systems, 40-41, 341–361.
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Smith, R. A. (2007). Trends in Maximum and Minimum Temperature Deciles in Select Regions of the United States. Master's thesis, Florida State University, Tallahassee, FL.
Abstract: Daily maximum and minimum temperature data from 758 COOP stations in nineteen states are used to create temperature decile maps. All stations used contain records from 1948 through 2004 and could not be missing more than 5 consecutive years of data. Missing data are replaced using a multiple linear regression technique from surrounding stations. For each station, the maximum and minimum temperatures are first sorted in ascending order for every two years (to reduce annual variability) and divided into ten equal parts (or deciles). The first decile represents the coldest temperatures, and the last decile contains the warmest temperatures. Patterns and trends in these deciles can be examined for the 57-year period. A linear least-squares regression method is used to calculate best-fit lines for each decile to determine the long-term trends at each station. Significant warming or cooling is determined using the Student's t-test, and bootstrapping the decile data will further examine the validity of significance. Two stations are closely examined. Apalachicola, Florida shows significant warming in its maximum deciles and significant cooling in its minimum deciles. The maximum deciles seem to be affected by some localized change. The minimum deciles are discontinuous, and the trends are a result of a minor station move. Columbus, Georgia has experienced significant warming in its minimum deciles, and this appears to be the result of an urban heat-island effect. The discontinuities seen in the Apalachicola case study illustrate the need for a quality control method. This method will eliminate stations from the regional analysis that experience large changes in the ten-year standard deviations within their time series. The regional analysis shows that most of the region is dominated by significant cooling in the maximum deciles and significant warming in the minimum deciles, with more variability in the lower deciles. Field significance testing is performed on subregions (based on USGS 2000 land cover data) and supports the findings from the regional analysis; it also isolates regions, such as the Florida peninsula and the Maryland/Delaware region, that appear to be affected by more local forcings.
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